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Relevant Publications (of 110):

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  1. Gershoni, J. M., G. Denisova, D. Raviv, N. I. Smorodinsky, and D. Buyaner. 1993. HIV binding to its receptor creates specific epitopes for the CD4/gp120 complex. FASEB J 7:1185-7.

  2. Denisova, G., B. Stern, D. Raviv, J. Zwickel, N. I. Smorodinsky, and J. M. Gershoni. 1996. Humoral immune response to immunocomplexed HIV envelope glycoprotein 120. AIDS Res Hum Retroviruses 12:901-9.

  3. ​Stern, B., G. Denisova, D. Buyaner, D. Raviv, and J. M. Gershoni. 1997. Helical epitopes determined by low-stringency antibody screening of a combinatorial peptide library. FASEB J 11:147-53.

  4. Enshell-Seijffers, D., L. Smelyanski, and J. M. Gershoni. 2001. The rational design of a 'type 88' genetically stable peptide display vector in the filamentous bacteriophage fd. Nucleic Acids Res 29:E50-0.

  5. Enshell-Seijffers, D., L. Smelyanski, N. Vardinon, I. Yust, and J. M. Gershoni. 2001. Dissection of the humoral immune response toward an immunodominant epitope of HIV: a model for the analysis of antibody diversity in HIV+ individuals. FASEB J 15:2112-20.

  6. Enshell-Seijffers, D., D. Denisov, B. Groisman, L. Smelyanski, R. Meyuhas, G. Gross, G. Denisova, and J. M. Gershoni. 2003. The mapping and reconstitution of a conformational discontinuous B-cell epitope of HIV-1. J Mol Biol 334:87-101.

  7. Bublil, E. M., S. Yeger-Azuz, and J. M. Gershoni. 2006. Computational prediction of the cross-reactive neutralizing epitope corresponding to the monclonal antibody b12 specific for HIV-1 gp120. FASEB J 20:1762-74.

  8. Siman-Tov, D. D., L. Navon-Perry, N. L. Haigwood, and J. M. Gershoni. 2006. Differentiation of a passive vaccine and the humoral immune response toward infection: analysis of phage displayed peptides. Vaccine 24:607-12.

  9. Tarnovitski, N., L. J. Matthews, J. Sui, J. M. Gershoni, and W. A. Marasco. 2006. Mapping a neutralizing epitope on the SARS coronavirus spike protein: computational prediction based on affinity-selected peptides. J Mol Biol 359:190-201.

  10. Bublil, E. M., N. T. Freund, I. Mayrose, O. Penn, A. Roitburd-Berman, N. D. Rubinstein, T. Pupko, and J. M. Gershoni. 2007. Stepwise prediction of conformational discontinuous B-cell epitopes using the Mapitope algorithm. Proteins 68:294-304.

  11. Gershoni, J. M., A. Roitburd-Berman, D. D. Siman-Tov, N. Tarnovitski Freund, and Y. Weiss. 2007. Epitope mapping: the first step in developing epitope-based vaccines. BioDrugs 21:145-56.

  12. Mayrose, I., O. Penn, E. Erez, N. D. Rubinstein, T. Shlomi, N. T. Freund, E. M. Bublil, E. Ruppin, R. Sharan, J. M. Gershoni, E. Martz, and T. Pupko. 2007. Pepitope: epitope mapping from affinity-selected peptides. Bioinformatics 23:3244-6.

  13. Mayrose, I., T. Shlomi, N. D. Rubinstein, J. M. Gershoni, E. Ruppin, R. Sharan, and T. Pupko. 2007. Epitope mapping using combinatorial phage-display libraries: a graph-based algorithm. Nucleic Acids Res 35:69-78.

  14. Gershoni, J. M. 2008. Molecular decoys: antidotes, therapeutics and immunomodulators. Curr Opin Biotechnol 19:644-51.

  15. Rubinstein, N. D., I. Mayrose, D. Halperin, D. Yekutieli, J. M. Gershoni, and T. Pupko. 2008. Computational characterization of B-cell epitopes. Mol Immunol 45:3477-89.

  16. Freund, N. T., D. Enshell-Seijffers, and J. M. Gershoni. 2009. Phage display selection, analysis, and prediction of B cell epitopes. Curr Protoc Immunol Chapter 9:Unit 9 8.

  17. Gift S.K., I.J. Zentner, A. Schön, K. McFadden, M. Umashankara, S. Rajagopal, M. Contarino, C. Duffy, J.R. Courter, M.Y. Zhang, J.M. Gershoni, S. Cocklin, D.S. Dimitrov, A.B. Smith 3rd, E. Freire, I.M. Chaiken.  2011. Conformational and structural features of HIV-1 gp120 underlying the dual receptor antagonism by cross-reactive neutralizing antibody m18.  Biochemistry 50:2756-68

  18. Smelyanski, L., J.M. Gershoni  2011.  Site directed biotinylation of filamentous phage structural proteins.  Virol J. 2011 8:495

  19. Ryvkin, A., H. Ashkenazy, L. Smelyanski, G. Kaplan, O. Penn, Y. Weiss-Ottolenghi, E. Privman, P.B. Ngam, J.E. Woodward, G.D. May, C. Bell, T. Pupko, and J.M. Gershoni. 2012. Deep Panning: steps towards probing the IgOme. PLoS One 7:e41469.

  20. Kaplan, G., J.M. Gershoni. 2012.  A general insert label for peptide display on chimeric filamentous bacteriophages.  Anal Biochem. 420:68-72

  21. Siman-Tov, D.D., R. Zemel, R. Tur Kaspa, and J.M. Gershoni. 2013. The use of epitope arrays in immunodiagnosis of infectious disease: hepatitis C virus, a case study. Anal Biochem 432:63-7

  22. Roitburd-Berman, A., G. Dela, G. Kaplan, G.K. Lewis, and J.M. Gershoni. 2013. Allosteric Induction of the CD4-Bound Conformation of HIV-1 Gp120. Retrovirology 5:147

  23. Weiss-Ottolenghi, Y., and J.M. Gershoni. 2014. Profiling the IgOme: Meeting the challenge. FEBS Lett 588:318-25.

  24. Freund NT, Roitburd-Berman A, Sui J, Marasco WA, Gershoni JM. 2015. Reconstitution of the receptor-binding motif of the SARS coronavirus. Protein Eng Des Sel. 28:567-575.

  25. Kaplan G, Roitburd-Berman A, Lewis GK, Gershoni JM. 2016. Range of CD4-Bound Conformations of HIV-1 gp120, as Defined Using Conditional CD4-Induced Antibodies.  J Virol 90:4481-4493.

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